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Intron Name: Anas_platyrhynchos_platyrhynchos_27_239115_239663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

239115 - 239663

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAAAA

U12 Branch Point Sequence:

GGAGGATGAAAA

Flanking Amino Acid:

IAAIGGPPLAGNQDSFEYLA

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.1

77.9

38.6

Major BPS

49.7

-0

1.1

36.4

Major PPT

74.7

0.56

0.9

68.7

37.2

Minor 5ss

41.4

-1

58.6

45.9

Minor BPS

37.1

-0.9

41.65

Associated Gene:

Gene:

SLC16A4

Ensembl Gene ID:

ENSAPLG00000015458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016137

238253 - 245673

7421