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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2397514_2402776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2397514 - 2402776

Intron Length:

5263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCCCG

5'SS Class:

major

3'SS Sequence:

TGGTTTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTTAC

U12 Branch Point Sequence:

CTTGGCTTACGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

53.2

45.5

Major BPS

49.4

-0

1.3

43.1

41.5

Major PPT

78.6

0.64

72.9

42.2

Minor 5ss

32.3

-2

2.9

31.8

42.1

Minor BPS

43.9

-0.4

2.3

57.21

47.9

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967