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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2404180_2405209_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2404180 - 2405209

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

GGCTCCATGACG

Flanking Amino Acid:

MVTVAQIPSYRLNKICSGLS

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

79.6

0.67

0.8

78.2

30.7

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

53.5

-0

1.8

57.5

43.7

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778