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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2405367_2407265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2405367 - 2407265

Intron Length:

1899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTGA

5'SS Class:

major

3'SS Sequence:

TTACGTGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTTTTCATCT

Flanking Amino Acid:

HLQSQRNAEQKEQDEKTSAV

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

57.7

43.9

Major BPS

100

1.24

0.5

100

Major PPT

75.2

0.57

68.3

42.1

Minor 5ss

40.6

-1.1

3.4

56.3

47.8

Minor BPS

55.2

0.24

1.8

76.37

40.5

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778