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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2409575_2409952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2409575 - 2409952

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTATATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GTTTTTGTAATT

Flanking Amino Acid:

IFAEPVNLNEVPDYLEFISN

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.6

1.15

0.7

90.2

25.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

75.6

0.58

74.5

40.2

Minor 5ss

28.5

-2.5

3.9

43.8

43.9

Minor BPS

59.2

0.37

79.54

37.3

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778