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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2410266_2411500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2410266 - 2411500

Intron Length:

1235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

CTTCCCTTCACT

Flanking Amino Acid:

EDFYRFSWEDVDNILLPENR

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

85.3

0.8

80.7

31.4

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

0.71

1.8

85.35

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778