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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2411768_2411936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2411768 - 2411936

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTTATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGTTCCTTTATC

Flanking Amino Acid:

VKEEDEEGEKDDAKPPHPPT

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

78.6

0.64

0.9

77.8

35.2

Minor 5ss

26.7

-2.7

3.3

38.5

46.6

Minor BPS

72.5

0.69

1.6

79.58

35.5

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778