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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2412414_2414513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2412414 - 2414513

Intron Length:

2100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATTCCC

5'SS Class:

major

3'SS Sequence:

GTTTCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TGGGGCTGATTC

Flanking Amino Acid:

EKSPRQAGQRGVTNGFAKHA

Intron Amino Acid Position:

974

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

67.7

37.5

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

76.8

0.6

73.2

37.1

Minor 5ss

30.1

-2.3

2.7

36.9

40.1

Minor BPS

40.7

-0.7

47.37

42.5

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778