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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2414608_2417358_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2414608 - 2417358

Intron Length:

2751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTTTCCTAATA

Flanking Amino Acid:

RGSGLVLEACSGLMPPKRSR

Intron Amino Acid Position:

1005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

81.9

0.79

0.9

80.1

Major PPT

81.5

0.71

0.9

77.7

35.5

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

71.9

0.68

1.6

83.62

30.2

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778