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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2417457_2419511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2417457 - 2419511

Intron Length:

2055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAG

U12 Branch Point Sequence:

GCCCTTGTAAGC

Flanking Amino Acid:

VNGDSDYSSSGRTLLMAFES

Intron Amino Acid Position:

1038

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.8

35.2

Major BPS

60.5

0.26

1.7

69.7

44.2

Major PPT

75.3

0.57

0.8

73.8

31.3

Minor 5ss

28.6

-2.5

3.4

37.5

47.2

Minor BPS

40.1

-0.7

2.1

42.82

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778