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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2419610_2421545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2419610 - 2421545

Intron Length:

1936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGTCGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TTGTGCTTAAAT

Flanking Amino Acid:

CRGYPSYPALIIDPKMPREG

Intron Amino Acid Position:

1071

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

80.6

31.8

Major BPS

0.5

1.1

76.9

32.8

Major PPT

60.8

0.24

53.9

41.5

Minor 5ss

37.1

-1.5

2.7

44.2

37.1

Minor BPS

0.64

1.9

85.18

41.2

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778