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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2421701_2424198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2421701 - 2424198

Intron Length:

2498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGACCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TCTCCTCTGACC

Flanking Amino Acid:

LVLFFDNKRTWQWLPRDKVY

Intron Amino Acid Position:

1122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

68.4

0.41

0.9

61.7

33.4

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

55.7

0.16

1.7

67.95

37.8

Associated Gene:

Gene:

BRPF3

Ensembl Gene ID:

ENSAPLG00000000598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041413

2396634 - 2425600

28967

ENSAPLT00000000840

2401823 - 2425600

23778