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Intron Name: Anas_platyrhynchos_platyrhynchos_27_242520_242806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

242520 - 242806

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

AAAAAAAAAAAA

Flanking Amino Acid:

QLLIDSYGWQGTLLIFGGIM

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

76.7

33.9

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

73.1

0.52

0.9

37.3

Minor 5ss

34.2

-1.8

2.8

40.7

45.3

Minor BPS

32.9

-1.3

1.9

38.05

31.7

Associated Gene:

Gene:

SLC16A4

Ensembl Gene ID:

ENSAPLG00000015458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016137

238253 - 245673

7421

ENSAPLT00000035498

234222 - 245673

11452

ENSAPLT00000035282

234222 - 245753

11532

ENSAPLT00000028843

234222 - 245673

11452

ENSAPLT00000022376

234222 - 245264

11043