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Intron Name: Anas_platyrhynchos_platyrhynchos_27_242969_243431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

242969 - 243431

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCTGC

5'SS Class:

major

3'SS Sequence:

ACCTGTATCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAT

U12 Branch Point Sequence:

TTGGCACTAACA

Flanking Amino Acid:

FLCISMGLLLGMGFCCLYQA

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.1

41.9

Major BPS

58.7

0.22

1.2

Major PPT

68.6

0.42

0.9

61.8

38.1

Minor 5ss

38.3

-1.3

41.6

45.3

Minor BPS

51.1

0.03

2.1

69.32

42.7

Associated Gene:

Gene:

SLC16A4

Ensembl Gene ID:

ENSAPLG00000015458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022376

234222 - 245264

11043

ENSAPLT00000016137

238253 - 245673

7421

ENSAPLT00000035498

234222 - 245673

11452

ENSAPLT00000035282

234222 - 245753

11532