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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2433069_2433498_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2433069 - 2433498

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGCAT

U12 Branch Point Sequence:

CTGCCCCAAACT

Flanking Amino Acid:

KEILDEEDFQGLLMLLQNLP

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

72.6

37.3

Major BPS

55.5

0.14

1.4

40.9

Major PPT

82.6

0.73

0.7

25.4

Minor 5ss

37.2

-1.4

2.9

46.5

35.3

Minor BPS

0.01

2.1

69.97

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016152

2432940 - 2434852

1913