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Intron Name: Anas_platyrhynchos_platyrhynchos_27_243576_243928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

243576 - 243928

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TTTTCCTTTACA

Flanking Amino Acid:

SIMSSLRFLGAPLVAMVCRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

77.5

32.9

Major BPS

0.47

1.2

61.1

45.5

Major PPT

92.9

0.96

0.6

87.9

22.2

Minor 5ss

34.2

-1.8

2.9

42.1

Minor BPS

83.6

1.05

1.4

91.85

28.4

Associated Gene:

Gene:

SLC16A4

Ensembl Gene ID:

ENSAPLG00000015458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016137

238253 - 245673

7421

ENSAPLT00000035498

234222 - 245673

11452

ENSAPLT00000035282

234222 - 245753

11532

ENSAPLT00000022376

234222 - 245264

11043