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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2462402_2464046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2462402 - 2464046

Intron Length:

1645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

TCGGCATTATTC

Flanking Amino Acid:

VYQMLKGLKVGPEARQPGCE

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

62.4

0.31

32.1

Major PPT

78.8

0.65

0.9

77.4

36.9

Minor 5ss

-2.2

3.2

46.1

Minor BPS

46.5

-0.2

1.9

54.71

Associated Gene:

Gene:

MAPK13

Ensembl Gene ID:

ENSAPLG00000002168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002278

2462346 - 2469939

7594