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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2462877_2464050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2462877 - 2464050

Intron Length:

1174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCTCTTTTTATT

Flanking Amino Acid:

LVYQMLKGLKYIHSAGIIHR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.6

0.89

0.7

85.1

27.9

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

49.4

0.03

1.6

63.82

41.3

Associated Gene:

Gene:

MAPK13

Ensembl Gene ID:

ENSAPLG00000002168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025762

2461232 - 2465340

4109