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Intron Name: Anas_platyrhynchos_platyrhynchos_27_249725_249799_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

249725 - 249799

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

TTTCTGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GGGCGCTCACCG

Flanking Amino Acid:

EGTLEQHLEDTMKSPAVVGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.4

43.3

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

0.65

0.8

73.5

31.5

Minor 5ss

28.6

-2.5

3.7

35.6

42.1

Minor BPS

38.8

-0.9

2.1

38.67

43.9

Associated Gene:

Gene:

LAMTOR5

Ensembl Gene ID:

ENSAPLG00000028465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047838

248411 - 249834

1424