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Intron Name: Anas_platyrhynchos_platyrhynchos_27_249725_250636_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

249725 - 250636

Intron Length:

912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGCGATGC

5'SS Class:

weak_major

3'SS Sequence:

TTTCTGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GGGCGCTCACCG

Flanking Amino Acid:

VSLAEHHMKSPAVVGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.1

48.1

37.6

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

0.65

0.8

73.5

31.5

Minor 5ss

-1.8

3.3

46.5

43.2

Minor BPS

38.8

-0.9

2.1

38.67

43.9

Associated Gene:

Gene:

LAMTOR5

Ensembl Gene ID:

ENSAPLG00000028465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035030

248411 - 250656

2246