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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2499747_2500461_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

2499747 - 2500461

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTATGTAGG

5'SS Class:

weak_major

3'SS Sequence:

TTCTTTATTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTCTTTATTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.3

46.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.4

0.86

0.7

81.4

Minor 5ss

42.7

-0.8

2.5

51.1

40.1

Minor BPS

67.2

0.52

1.5

74.74

36.3

Associated Gene:

Gene:

SLC26A8

Ensembl Gene ID:

ENSAPLG00000002988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003040

2499685 - 2521845

22161