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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2509902_2511067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2509902 - 2511067

Intron Length:

1166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTC

Flanking Amino Acid:

LGYFFQMIPNGVLAAIVVFN

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

79.7

28.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.4

0.69

0.9

75.6

38.3

Minor 5ss

34.4

-1.8

3.3

44.6

43.6

Minor BPS

67.3

0.52

1.5

77.16

33.3

Associated Gene:

Gene:

SLC26A8

Ensembl Gene ID:

ENSAPLG00000002988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037794

2498253 - 2521845

23593

ENSAPLT00000018918

2500462 - 2522681

22220

ENSAPLT00000003040

2499685 - 2521845

22161