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Intron Name: Anas_platyrhynchos_platyrhynchos_27_252033_253275_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

252033 - 253275

Intron Length:

1243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TCCCCCCCATCG

Flanking Amino Acid:

PLLRGAVITGACERDLQCGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

61.3

0.28

52.7

34.2

Major PPT

74.4

0.55

0.9

65.7

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

41.3

-0.8

2.1

45.76

46.3

Associated Gene:

Gene:

PROK1

Ensembl Gene ID:

ENSAPLG00000015823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016496

251958 - 254308

2351