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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2520448_2521588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2520448 - 2521588

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATAT

5'SS Class:

strong_major

3'SS Sequence:

GTGTACATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

TTGGCCTAGAGC

Flanking Amino Acid:

ADKLQAKHQKKTESLLEKTR

Intron Amino Acid Position:

782

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

77.7

33.3

Major BPS

67.6

0.44

1.2

Major PPT

71.9

0.49

67.1

43.4

Minor 5ss

38.2

-1.3

3.4

55.2

Minor BPS

47.4

-0.2

2.1

60.91

45.2

Associated Gene:

Gene:

SLC26A8

Ensembl Gene ID:

ENSAPLG00000002988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037794

2498253 - 2521845

23593

ENSAPLT00000018918

2500462 - 2522681

22220

ENSAPLT00000003040

2499685 - 2521845

22161