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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2542144_2542822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2542144 - 2542822

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCATCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CCTTTTCTAATA

Flanking Amino Acid:

LPCVKKIIKQVLQGLDYLHT

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.4

0.66

0.8

73.3

30.4

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

53.4

0.1

1.7

62.52

38.9

Associated Gene:

Gene:

SRPK1

Ensembl Gene ID:

ENSAPLG00000003371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040175

2536803 - 2551298

14496

ENSAPLT00000035176

2536818 - 2551866

15049

ENSAPLT00000029523

2527863 - 2551298

23436

ENSAPLT00000003474

2527863 - 2551866

24004

ENSAPLT00000045176

2534130 - 2551866

17737