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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2542989_2544024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2542989 - 2544024

Intron Length:

1036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTTTTT

5'SS Class:

major

3'SS Sequence:

CTTTCCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

ATTGCCTGATCT

Flanking Amino Acid:

SGAPPPSGSAVSTAPQPKPA

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

76.9

34.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

87.6

0.85

0.6

22.6

Minor 5ss

39.7

-1.2

3.2

58.4

46.1

Minor BPS

58.7

0.35

1.9

79.41

42.4

Associated Gene:

Gene:

SRPK1

Ensembl Gene ID:

ENSAPLG00000003371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040175

2536803 - 2551298

14496

ENSAPLT00000035176

2536818 - 2551866

15049

ENSAPLT00000029523

2527863 - 2551298

23436

ENSAPLT00000003474

2527863 - 2551866

24004

ENSAPLT00000045176

2534130 - 2551866

17737