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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2545236_2545310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2545236 - 2545310

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAATTACA

5'SS Class:

major

3'SS Sequence:

TTCGTGCCCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAA

U12 Branch Point Sequence:

CCTCAAGCAACA

Flanking Amino Acid:

HTQKKENFHSFAEDSMVCQP

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.1

68.2

36.1

Major BPS

55.4

0.13

1.2

59.5

Major PPT

68.7

0.42

0.9

66.1

35.9

Minor 5ss

38.7

-1.3

2.7

49.9

40.2

Minor BPS

36.8

-1

2.3

47.2

42.3

Associated Gene:

Gene:

SRPK1

Ensembl Gene ID:

ENSAPLG00000003371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040175

2536803 - 2551298

14496

ENSAPLT00000029523

2527863 - 2551298

23436