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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2545458_2546903_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2545458 - 2546903

Intron Length:

1446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAGAG

5'SS Class:

major

3'SS Sequence:

GTGTTGCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTAGCTTTAATC

Flanking Amino Acid:

NENNSPSDNKGKSTAGNFLL

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

59.5

39.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

68.5

0.42

59.2

42.9

Minor 5ss

28.1

-2.5

3.5

37.6

47.2

Minor BPS

65.2

0.46

1.4

67.59

38.4

Associated Gene:

Gene:

SRPK1

Ensembl Gene ID:

ENSAPLG00000003371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003474

2527863 - 2551866

24004

ENSAPLT00000045176

2534130 - 2551866

17737

ENSAPLT00000040175

2536803 - 2551298

14496

ENSAPLT00000035176

2536818 - 2551866

15049

ENSAPLT00000029523

2527863 - 2551298

23436