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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2547005_2547924_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2547005 - 2547924

Intron Length:

920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

CCATTTCCAACC

Flanking Amino Acid:

IADLGNACWVHKHFTEDIQT

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

77.9

0.63

0.9

77.7

36.7

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

44.9

-0.4

1.8

51.19

40.1

Associated Gene:

Gene:

SRPK1

Ensembl Gene ID:

ENSAPLG00000003371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035176

2536818 - 2551866

15049

ENSAPLT00000029523

2527863 - 2551298

23436

ENSAPLT00000003474

2527863 - 2551866

24004

ENSAPLT00000045176

2534130 - 2551866

17737

ENSAPLT00000040175

2536803 - 2551298

14496