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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2548033_2549381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2548033 - 2549381

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

AGTGCATTAAAG

Flanking Amino Acid:

PADIWSTACMAFELATGDYL

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

0.72

78.4

31.2

Major PPT

79.3

0.66

0.9

77.4

36.9

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

49.8

-0.1

1.9

57.46

43.3

Associated Gene:

Gene:

SRPK1

Ensembl Gene ID:

ENSAPLG00000003371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040175

2536803 - 2551298

14496

ENSAPLT00000035176

2536818 - 2551866

15049

ENSAPLT00000029523

2527863 - 2551298

23436

ENSAPLT00000003474

2527863 - 2551866

24004

ENSAPLT00000045176

2534130 - 2551866

17737