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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2549983_2550681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2549983 - 2550681

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

CGTGGCTGAAGT

Flanking Amino Acid:

KYSKEFFTKKGDLKHITKLK

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

80.8

0.69

0.9

76.9

37.3

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

-0.3

2.2

60.99

48.3

Associated Gene:

Gene:

SRPK1

Ensembl Gene ID:

ENSAPLG00000003371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040175

2536803 - 2551298

14496

ENSAPLT00000035176

2536818 - 2551866

15049

ENSAPLT00000029523

2527863 - 2551298

23436

ENSAPLT00000003474

2527863 - 2551866

24004

ENSAPLT00000045176

2534130 - 2551866

17737