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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2560175_2560279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2560175 - 2560279

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCTAC

U12 Branch Point Sequence:

GGCCCCTCTACC

Flanking Amino Acid:

AAELQDCSPKSLYGVYYKCP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

45.6

-0.2

1.3

41.7

38.6

Major PPT

0.4

0.8

29.2

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

-0.2

1.9

54.6

42.7

Associated Gene:

Gene:

CLPS

Ensembl Gene ID:

ENSAPLG00000003624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003696

2559625 - 2560411

787