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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2592097_2592899_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2592097 - 2592899

Intron Length:
803

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGGGGT

5'SS Class:
strong_major

3'SS Sequence:
TCTGCCCTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAT

U12 Branch Point Sequence:
CTCTCCCCATTT

Flanking Amino Acid:
GEHCVLYLGPRYGFGEAGKP

Intron Amino Acid Position:
265

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.2
0.71
1
68.2
43

Major BPS
79
0.72
1
69
38.9

Major PPT
79.2
0.66
0.8
69.6
36.7

Minor 5ss
31.4
-2.1
3.7
47.2
48.2

Minor BPS
45.3
-0.2
2.1
64.51
46.2

Associated Gene:

Gene:
FKBP5

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2585765 - 2722743
136979

2585148 - 2596751
11604

2585789 - 2596105
10317