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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2602804_2602898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2602804 - 2602898

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGGTG

5'SS Class:

major

3'SS Sequence:

CCGTGTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACGTAAC

U12 Branch Point Sequence:

CGCCACGTAACG

Flanking Amino Acid:

EKKEKKSKKKAATGSDEEDD

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

58.9

Major BPS

53.1

0.08

1.2

55.3

37.9

Major PPT

67.2

0.39

0.9

57.6

38.6

Minor 5ss

37.3

-1.4

3.8

55.1

49.1

Minor BPS

43.4

-0.6

2.2

46.33

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024268

2602040 - 2604619

2580