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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2603034_2603165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2603034 - 2603165

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGCTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGCT

U12 Branch Point Sequence:

TTCTGCTCACAG

Flanking Amino Acid:

PPKEKKTRKKAPPKAADSEE

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.8

35.2

Major BPS

36.1

-0.8

4.3

65.3

43.7

Major PPT

75.3

0.57

0.9

68.4

37.5

Minor 5ss

28.6

-2.5

3.4

37.5

47.2

Minor BPS

42.9

-0.6

2.3

52.48

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024268

2602040 - 2604619

2580