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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2616190_2616419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2616190 - 2616419

Intron Length:

230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

ACGGGCTGAGCC

Flanking Amino Acid:

IGVGELLWGQLICTIPTSRL

Intron Amino Acid Position:

1047

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

70.6

0.46

0.7

61.4

29.1

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

40.5

-0.7

45.06

43.4

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043505

2615407 - 2643216

27810

ENSAPLT00000041214

2615407 - 2630638

15232

ENSAPLT00000013459

2615786 - 2630576

14791