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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2617088_2617340_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2617088 - 2617340

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCTTC

5'SS Class:

major

3'SS Sequence:

CTCGCCTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGAAAA

U12 Branch Point Sequence:

CCTGCCTCCACC

Flanking Amino Acid:

LTIIFTLLFVGEKLFDIDSG

Intron Amino Acid Position:

940

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.2

38.5

Major BPS

43.3

-0.4

1.1

42.6

34.8

Major PPT

62.9

0.29

0.9

61.1

35.1

Minor 5ss

42.5

-0.8

50.6

46.1

Minor BPS

47.3

-0.2

2.1

57.89

47.1

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043505

2615407 - 2643216

27810

ENSAPLT00000041214

2615407 - 2630638

15232

ENSAPLT00000013459

2615786 - 2630576

14791