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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2617555_2617649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2617555 - 2617649

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

CCTCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

GGTGGTGTGACA

Flanking Amino Acid:

VAFTGACITQDSPLKAVQML

Intron Amino Acid Position:

869

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

65.7

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

79.5

0.66

0.7

73.1

25.1

Minor 5ss

28.5

-2.5

3.6

41.2

45.5

Minor BPS

40.5

-0.7

2.3

50.98

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041214

2615407 - 2630638

15232

ENSAPLT00000013459

2615786 - 2630576

14791

ENSAPLT00000043505

2615407 - 2643216

27810