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Intron Name: Anas_platyrhynchos_platyrhynchos_27_261773_261965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

261773 - 261965

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCAAATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

TCTTGCTCAAAT

Flanking Amino Acid:

PVSASAYTEQNNEEACISGF

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

66.5

0.37

59.1

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

0.24

2.1

77.48

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016539

258688 - 262103

3416