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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2617842_2618792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2617842 - 2618792

Intron Length:

951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGGACT

5'SS Class:

major

3'SS Sequence:

CCCTGCTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

TGTGCCTCATCC

Flanking Amino Acid:

LKKADVGFAMGIAGTDVAKE

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

68.8

41.8

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

62.9

0.29

59.4

Minor 5ss

33.7

-1.9

3.5

45.9

43.5

Minor BPS

52.5

0.06

1.9

67.5

43.8

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043505

2615407 - 2643216

27810

ENSAPLT00000041214

2615407 - 2630638

15232

ENSAPLT00000013459

2615786 - 2630576

14791