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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2618900_2619043_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2618900 - 2619043

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCGATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TTTTCCCCACGC

Flanking Amino Acid:

SPTDKHTLVKGIIDSTVGDQ

Intron Amino Acid Position:

769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

64.9

0.34

57.9

37.5

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

45.7

-0.3

2.3

67.47

44.1

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043505

2615407 - 2643216

27810

ENSAPLT00000041214

2615407 - 2630638

15232

ENSAPLT00000013459

2615786 - 2630576

14791