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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2619132_2619263_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2619132 - 2619263

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCTCC

5'SS Class:

major

3'SS Sequence:

CCATGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

CTGCTCATATCC

Flanking Amino Acid:

NRLIRNEKGEVEQEQLDKIW

Intron Amino Acid Position:

740

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

62.8

38.8

Major BPS

79.7

0.74

79.6

35.6

Major PPT

72.6

0.51

0.9

65.5

35.9

Minor 5ss

38.3

-1.3

3.2

50.4

46.4

Minor BPS

46.1

-0.3

1.9

56.05

42.4

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043505

2615407 - 2643216

27810

ENSAPLT00000041214

2615407 - 2630638

15232

ENSAPLT00000013459

2615786 - 2630576

14791