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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2619444_2620457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2619444 - 2620457

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCAAAG

5'SS Class:

major

3'SS Sequence:

TGCCCGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

CCCTGCCCACCC

Flanking Amino Acid:

VGIEDPVRPEVPDAILKCQR

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.7

43.6

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

66.9

0.38

0.9

57.2

38.6

Minor 5ss

37.3

-1.4

3.1

48.6

47.1

Minor BPS

36.4

-1

2.2

42.5

44.8

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043505

2615407 - 2643216

27810

ENSAPLT00000041214

2615407 - 2630638

15232

ENSAPLT00000013459

2615786 - 2630576

14791