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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2620693_2621028_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2620693 - 2621028

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATCGTC

5'SS Class:

major

3'SS Sequence:

TGGTCCCACGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TCTCCCTCACCC

Flanking Amino Acid:

SKGASEIILRKCTRILDKNG

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

66.2

38.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

0.25

0.9

55.5

35.4

Minor 5ss

42.7

-0.8

3.4

59.2

39.9

Minor BPS

54.8

0.13

1.9

68.24

43.3

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013459

2615786 - 2630576

14791

ENSAPLT00000043505

2615407 - 2643216

27810

ENSAPLT00000041214

2615407 - 2630638

15232