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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2621941_2622038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2621941 - 2622038

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GTCCCCTCACCT

Flanking Amino Acid:

TRLAVQIGKAGLIMSAITVI

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

85.3

0.79

0.7

30.8

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

51.5

0.12

1.9

70.65

45.7

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041214

2615407 - 2630638

15232

ENSAPLT00000013459

2615786 - 2630576

14791

ENSAPLT00000043505

2615407 - 2643216

27810