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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2622201_2623763_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2622201 - 2623763

Intron Length:

1563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCAGC

5'SS Class:

major

3'SS Sequence:

CCTGGGGCTGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

GGTGTCTTATTT

Flanking Amino Acid:

KTGAPENRNKAKTQDGVALE

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

67.1

44.6

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

58.2

0.19

49.9

39.3

Minor 5ss

45.3

-0.5

2.7

61.2

43.3

Minor BPS

53.4

0.19

1.7

68.7

42.6

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043505

2615407 - 2643216

27810

ENSAPLT00000013459

2615786 - 2630576

14791