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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2625902_2626525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2625902 - 2626525

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GCTCCTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGGAC

U12 Branch Point Sequence:

TGGGACCGACCC

Flanking Amino Acid:

VVGDIAQIKYGDLLPADGIL

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

43.7

-0.3

1.4

38.2

41.7

Major PPT

69.9

0.45

0.8

61.6

34.9

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

37.4

-0.9

45.74

42.3

Associated Gene:

Gene:

ATP2B4

Ensembl Gene ID:

ENSAPLG00000012830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041214

2615407 - 2630638

15232

ENSAPLT00000013459

2615786 - 2630576

14791

ENSAPLT00000043505

2615407 - 2643216

27810