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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2680055_2680219_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2680055 - 2680219

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGTGCT

5'SS Class:

major

3'SS Sequence:

CCTCTTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

GGAGCTTCACCT

Flanking Amino Acid:

STGLQPEAFRDLKQLQFLHL

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.1

65.8

40.2

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

77.6

0.62

0.7

71.8

26.4

Minor 5ss

-2.5

3.3

32.2

42.4

Minor BPS

45.1

-0.2

1.9

58.46

44.3

Associated Gene:

Gene:

OPTC

Ensembl Gene ID:

ENSAPLG00000014416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015036

2679698 - 2683596

3899