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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2689289_2689537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2689289 - 2689537

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTACCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAT

U12 Branch Point Sequence:

TATCCACTACCT

Flanking Amino Acid:

LPLVLVLISENNFIDDLPEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

63.3

0.33

1.2

65.6

39.7

Major PPT

75.8

0.58

0.8

66.1

34.8

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

47.4

-0.1

2.2

73.21

42.7

Associated Gene:

Gene:

PRELP

Ensembl Gene ID:

ENSAPLG00000014551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015160

2688597 - 2723991

35395