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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2768069_2768729_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2768069 - 2768729

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CAGTGCAGCCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TCTGTTTTAAGT

Flanking Amino Acid:

MAKLTLLTDLPHLLRVSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.7

40.1

Major BPS

75.6

0.64

1.5

34.5

Major PPT

53.7

0.08

1.1

43.4

41.9

Minor 5ss

37.3

-1.4

52.6

43.7

Minor BPS

58.8

0.35

1.7

74.22

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008396

2768044 - 2771968

3925